Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
28
candidate regulatory elements
19
target gene predictions
15
accessible chromatin
14
chromatin state
7
gene expression
4
eQTL
3
histone modifications
2
binding sites
2
variant allelic effects
Date released
39
September, 2022
32
February, 2021
5
November, 2021
4
January, 2022
3
June, 2020
3
March, 2024
2
February, 2024
2
January, 2021
1
March, 2020
1
May, 2020
1
May, 2021
1
May, 2022
Available data
69
bed bed3+
13
bed bed9
12
bigWig
7
tsv
1
bed bed9+
Organism
94
Homo sapiens
Biosample type
70
tissue
cell line
24
primary cell
Organ
916
epithelium
611
kidney
437
connective tissue
389
brain
358
musculature of body
258
vasculature
255
intestine
248
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
130
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
22
lymphatic vessel
21
vein
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
87
AMP
5
ENCODE
2
T1D
Genome assembly (visualization)
83
hg19
30
GRCh38
biosample_type!
cell line
BIOSAMPLE
TYPE
94 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
eQTL
histone modifications
binding sites
variant allelic effects
tissue
breast epithelium
5
3
1
2
esophagus muscularis mucosa
5
2
1
2
1
esophagus squamous epithelium
6
2
1
2
esophagus
4
3
2
1
bone tissue
4
+ See 16 more…
primary cell
epithelial cell of esophagus
2
1
1
2
megakaryocyte
2
2
smooth muscle cell of the esophagus
2
2
stromal cell of bone marrow
2
1
1
mononuclear cell of bone marrow
1
2
+ See 3 more…
See all biosamples
Download