Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
108
candidate regulatory elements
68
target gene predictions
57
chromatin state
18
accessible chromatin
5
histone modifications
4
eQTL
4
gene expression
3
variant allelic effects
1
binding sites
Date released
158
September, 2022
61
February, 2021
19
November, 2021
7
June, 2020
5
May, 2021
4
August, 2017
4
February, 2024
4
January, 2022
4
March, 2024
2
March, 2020
Available data
207
bed bed3+
53
bed bed9
11
bigWig
4
tsv
Organism
268
Homo sapiens
Biosample type
245
tissue
cell line
23
primary cell
Organ
916
epithelium
611
kidney
437
connective tissue
389
brain
358
musculature of body
258
vasculature
255
intestine
248
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
130
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
22
lymphatic vessel
21
vein
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
249
AMP
19
ENCODE
Genome assembly (visualization)
260
hg19
76
GRCh38
biosample_type!
cell line
organ_slims!
bronchus
BIOSAMPLE
TYPE
268 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
gene expression
variant allelic effects
binding sites
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
Peyer's patch
7
3
3
1
+ See 18 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
enterocyte of epithelium of small intestine
1
1
paneth cell
1
1
+ See 2 more…
See all biosamples
Download