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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
248
gene expression
205
accessible chromatin
183
candidate regulatory elements
161
target gene predictions
90
chromatin state
89
differential activity
39
variant allelic effects
37
binding sites
24
histone modifications
6
eQTL
2
caQTL
Date released
252
September, 2022
225
February, 2021
155
September, 2023
127
November, 2021
77
February, 2024
36
March, 2023
26
June, 2020
23
August, 2021
23
May, 2021
20
January, 2021
15
November, 2022
13
January, 2020
13
May, 2020
11
February, 2023
10
May, 2024
9
February, 2020
7
April, 2020
7
March, 2020
6
August, 2017
6
August, 2018
6
October, 2022
5
March, 2024
5
October, 2019
3
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
653
bed bed3+
318
tsv
175
bigWig
84
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1084
Homo sapiens
Biosample type
829
primary cell
229
tissue
cell line
26
in vitro differentiated cells
Organ
916
epithelium
611
kidney
437
connective tissue
389
brain
358
musculature of body
258
vasculature
255
intestine
248
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
130
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
22
lymphatic vessel
21
vein
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
775
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
740
hg19
280
GRCh38
biosample_type!
cell line
BIOSAMPLE
TYPE
1084 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
3
7
2
2
1
1
2
hepatocyte
13
8
2
3
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 146 more…
tissue
large intestine
1
27
14
13
1
spleen
1
2
15
8
6
1
1
sigmoid colon
1
10
7
5
pigmented layer of retina
20
transverse colon
1
8
5
4
1
+ See 28 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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