Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
73
candidate regulatory elements
44
target gene predictions
39
chromatin state
8
accessible chromatin
4
eQTL
4
gene expression
4
histone modifications
3
binding sites
1
variant allelic effects
Date released
107
September, 2022
44
February, 2021
6
November, 2021
5
June, 2020
4
January, 2022
4
March, 2024
4
May, 2021
3
August, 2017
2
February, 2024
1
March, 2020
Available data
136
bed bed3+
36
bed bed9
4
tsv
3
bigWig
Organism
180
Homo sapiens
Biosample type
160
tissue
cell line
20
primary cell
Organ
916
epithelium
611
kidney
437
connective tissue
389
brain
358
musculature of body
258
vasculature
255
intestine
248
heart
243
pancreas
237
limb
215
lung
198
blood vessel
143
extraembryonic component
140
large intestine
134
skin of body
130
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
22
lymphatic vessel
21
vein
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
174
AMP
6
ENCODE
Genome assembly (visualization)
172
hg19
46
GRCh38
biosample_type!
cell line
BIOSAMPLE
TYPE
180 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
histone modifications
binding sites
variant allelic effects
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
prostate gland
4
2
2
1
1
2
2
colonic mucosa
4
2
3
1
+ See 11 more…
primary cell
epithelial cell of prostate
4
3
2
colon epithelial cell
3
3
fibroblast of gingiva
2
1
1
luminal epithelial cell of prostatic duct
1
See all biosamples
Download