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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
41
candidate regulatory elements
30
target gene predictions
24
chromatin state
24
gene expression
23
accessible chromatin
9
binding sites
8
eQTL
8
histone modifications
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
66
September, 2022
29
February, 2021
29
February, 2024
10
March, 2020
9
August, 2021
6
November, 2021
4
June, 2020
4
March, 2023
4
May, 2020
3
January, 2020
3
May, 2021
2
August, 2017
2
February, 2020
2
May, 2022
2
May, 2024
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
116
bed bed3+
28
tsv
23
bigWig
22
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
179
Homo sapiens
Biosample type
106
tissue
66
primary cell
cell line
7
in vitro differentiated cells
Organ
916
epithelium
611
kidney
437
connective tissue
389
brain
358
musculature of body
258
vasculature
255
intestine
248
heart
243
pancreas
237
limb
215
lung
198
blood vessel
extraembryonic component
140
large intestine
134
skin of body
130
liver
119
stomach
99
eye
88
embryo
86
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
51
mammary gland
49
penis
49
thymus
45
esophagus
43
gonad
40
spinal cord
36
bone element
34
spleen
25
nerve
25
prostate gland
23
ovary
23
thyroid gland
22
lymphatic vessel
21
vein
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
173
AMP
6
ENCODE
Genome assembly (visualization)
148
hg19
66
GRCh38
1
hg18
biosample_type!
cell line
organ_slims!
extraembryonic component
BIOSAMPLE
TYPE
179 results
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candidate regulatory elements
target gene predictions
chromatin state
gene expression
accessible chromatin
binding sites
eQTL
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
caQTL
tissue
liver
13
10
9
1
4
1
7
2
1
1
thymus
20
14
11
1
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
2
3
1
13
8
1
4
2
endothelial cell of hepatic sinusoid
4
6
6
hepatic stellate cell
2
1
1
1
3
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
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in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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