Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 86target gene predictions
  • 48candidate regulatory elements
  • 30accessible chromatin
  • 21chromatin state
  • 11binding sites
  • 8histone modifications
  • 3eQTL
  • 2gene expression
  • 1variant allelic effects
Date released
  • 76July, 2026
  • 60September, 2022
  • 44February, 2021
  • 10November, 2021
  • 6June, 2020
  • 4May, 2021
  • 3January, 2022
  • 3October, 2022
  • 2March, 2024
  • 1August, 2017
  • 1February, 2024
Available data
  • 188bed bed3+
  • 20bed bed9
  • 5bigWig
  • 2tsv
Organism
  • 210Homo sapiens
Collection Tags
  • 60EpiMap
  • 38ENCODE-rE2G
  • 38HDMA
  • 31ENCODE
  • 22ChIP-Atlas
  • 10AMP
  • 10T2DKP
  • 5DGA
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
  • 2GTEx
Biosample type
  • 171primary cell
  • cell line
  • 30tissue
  • 9in vitro differentiated cells
Organ
  • 3118blood
  • 2891vasculature
  • 2855blood vessel
  • 2657vein
  • 2648bodily fluid
  • 909epithelium
  • 813brain
  • 708kidney
  • 487connective tissue
  • 479heart
  • 369musculature of body
  • 311lung
  • 300intestine
  • 282pancreas
  • 237limb
  • 210skin of body
  • 208liver
  • 170extraembryonic component
  • 168large intestine
  • 149eye
  • 140stomach
  • 139adipose tissue
  • 110muscle organ
  • 102adrenal gland
  • 97small intestine
  • 93placenta
  • 93thymus
  • 88embryo
  • 84artery
  • 73ureter
  • 63spleen
  • 60__MARKER__
  • 56gonad
  • 55mammary gland
  • 49penis
  • 48esophagus
  • 47thyroid gland
  • 46spinal cord
  • 41bone element
  • 32ovary
  • 27prostate gland
  • 25nerve
  • 23testis
  • 22skeleton
  • 20uterus
  • 19lymphatic vessel
  • 18lymphoid tissue
  • 17mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 12tongue
  • 12vagina
  • 11urinary bladder
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 200AMP
  • 10ENCODE
Genome assembly (visualization)
  • 129hg19
  • 109GRCh38
biosample_type!
  • cell line
BIOSAMPLE
TYPE

210 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
primary cell
keratinocyte9343121
foreskin keratinocyte6114
foreskin fibroblast661142
dermis blood vessel endothelial cell662
fibroblast of dermis5431
tissue
lower leg skin462
skin of body2113
suprapubic skin23
skin of forearm11
skin of prepuce of penis11
in vitro differentiated cells
foreskin keratinocyte111
iPS DF 4.7 Cell Line111
dermis microvascular lymphatic vessel endothelial cell11
skin fibroblast1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego