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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 7ChIP-seq
  • 1CRISPR RNA-seq
  • 1CRISPRi RNA-seq
  • 1RNA microarray
  • 1snATAC-seq
Assay category
  • 7DNA binding
  • 2Transcription
  • 1DNA accessibility
Target of assay
  • 6histone
  • 6histone modification
  • 4broad histone mark
  • 2narrow histone mark
  • 1control
Date released
  • 7August, 2017
  • 2March, 2023
  • 1April, 2020
  • 1August, 2021
Available data
  • 7bam
  • 7fastq
  • 7tagAlign
  • 6bed broadPeak
  • 6bed narrowPeak
  • 6bigBed narrowPeak
  • 6bigWig
Organism
  • Homo sapiens
Biosample type
  • 9tissue
  • cell line
  • 2stem cell
Organ
  • 7pancreas
  • 1adipose tissue
  • 1connective tissue
  • 1lung
Project
  • 8AMP
  • 2community
  • 1LungMap
Genome assembly (visualization)
  • 6GRCh38
  • 6hg19
Lab
  • 8AMP-T2D consortium
  • 2Anna Gloyn, Oxford
  • 1Xin Sun, UCSD
Audit category:
  • 1inconsistent assembly
biosample_type!
  • cell line
replicates.library.biosample.donor.organism.scientific_name!
  • Homo sapiens
BIOSAMPLE
ASSAY

11 results

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ChIP-seq
CRISPR RNA-seq
CRISPRi RNA-seq
RNA microarray
snATAC-seq
tissue
pancreas7
lung1
subcutaneous adipose tissue1
stem cell
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