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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1382candidate regulatory elements
  • 958target gene predictions
  • 753chromatin state
  • 750accessible chromatin
  • 668gene expression
  • 393histone modifications
  • 179eQTL
  • 174binding sites
  • 162differential activity
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 3variant allelic effects
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1969September, 2022
  • 1285February, 2021
  • 333November, 2021
  • 326May, 2021
  • 286September, 2023
  • 154February, 2024
  • 137June, 2020
  • 121March, 2020
  • 119August, 2021
  • 96January, 2022
  • 88January, 2020
  • 76May, 2020
  • 64February, 2020
  • 61March, 2023
  • 56January, 2021
  • 44November, 2022
  • 42May, 2022
  • 40May, 2024
  • 38March, 2025
  • 31February, 2023
  • 31October, 2022
  • 30August, 2017
  • 29March, 2024
  • 19April, 2020
  • 14October, 2019
  • 13November, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 3831bed bed3+
  • 3554tsv
  • 690bed bed9
  • 538bigWig
  • 108txt
  • 40bigBed bed9
  • 27bed bed9+
  • 26csv
  • 12bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 8134Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1962EpiMap
  • 748ENCODE
  • 542ChIP-Atlas
  • 521AMP
  • 457DGA
  • 401T2DKP
  • 396T1D
  • 281KPMP
  • 212BLUEPRINT
  • 150GTEx
  • 146 T2DKP
  • 101T2D
  • 91eQTLCatalogue
  • 88CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 64DN
Biosample type
  • 5275tissue
  • 2437primary cell
  • cell line
  • 464in vitro differentiated cells
  • 4stem cell
Organ
  • 2887vasculature
  • 2833blood vessel
  • 2655vein
  • 2654bodily fluid
  • 2653blood
  • 876epithelium
  • 596kidney
  • 433connective tissue
  • 373brain
  • 356musculature of body
  • 252intestine
  • 238heart
  • 233pancreas
  • 229limb
  • 214lung
  • 143extraembryonic component
  • 140large intestine
  • 133skin of body
  • 131liver
  • 117stomach
  • 97eye
  • 93adipose tissue
  • 88embryo
  • 84small intestine
  • 72adrenal gland
  • 71artery
  • 70placenta
  • 61ureter
  • 50mammary gland
  • 49penis
  • 49thymus
  • 43esophagus
  • 43gonad
  • 40spinal cord
  • 36bone element
  • 34spleen
  • 24prostate gland
  • 23nerve
  • 23ovary
  • 22lymphatic vessel
  • 22thyroid gland
  • 19testis
  • 18lymphoid tissue
  • 18skeleton
  • 18uterus
  • 15bronchus
  • 15mouth
  • 13bone marrow
  • 13breast
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1pericardium
Project
  • 7480AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 5ITG
  • 4community
Genome assembly (visualization)
  • 4574hg19
  • 1544GRCh38
  • 3hg18
biosample_type!
  • cell line
software_used.software.name!
  • deltasvm
BIOSAMPLE
TYPE

8182 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
eQTL
binding sites
differential activity
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
variant allelic effects
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720215311
stomach4021193111
kidney291416107211
brain29161821321
primary cell
monocyte218158641121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7514330
B cell1710862
endothelial cell371591122
in vitro differentiated cells
neural progenitor cell55410715
hematopoietic multipotent progenitor cell1910101111
adipocyte4664111
embryonic stem cell15611
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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