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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 958target gene predictions
  • 753chromatin state
  • 750accessible chromatin
  • 692candidate regulatory elements
  • 668gene expression
  • 393histone modifications
  • 179eQTL
  • 174binding sites
  • 162differential activity
  • 137variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1969September, 2022
  • 597February, 2021
  • 333November, 2021
  • 326May, 2021
  • 286September, 2023
  • 209February, 2024
  • 153May, 2020
  • 137June, 2020
  • 121March, 2020
  • 119August, 2021
  • 96January, 2022
  • 88January, 2020
  • 64February, 2020
  • 61March, 2023
  • 56January, 2021
  • 44November, 2022
  • 42May, 2022
  • 40May, 2024
  • 38March, 2025
  • 31February, 2023
  • 31October, 2022
  • 30August, 2017
  • 29March, 2024
  • 19April, 2020
  • 14October, 2019
  • 13November, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 3554tsv
  • 3259bed bed3+
  • 690bed bed9
  • 542bigWig
  • 108txt
  • 40bigBed bed9
  • 27bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 7578Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1962EpiMap
  • 585DGA
  • 542ChIP-Atlas
  • 521AMP
  • 405T2DKP
  • 396T1D
  • 281KPMP
  • 212BLUEPRINT
  • 156 T2DKP
  • 150GTEx
  • 101T2D
  • 91eQTLCatalogue
  • 88CMDGA
  • 67HPAP
  • 60ENCODE
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 64DN
Biosample type
  • 4845tissue
  • 2349primary cell
  • cell line
  • 426in vitro differentiated cells
  • 4stem cell
Organ
  • 2876vasculature
  • 2822blood vessel
  • 2652vein
  • 2650bodily fluid
  • 2649blood
  • 863epithelium
  • 534kidney
  • 411connective tissue
  • 349brain
  • 288musculature of body
  • 233pancreas
  • 214heart
  • 203intestine
  • 190limb
  • 165lung
  • 127liver
  • 117extraembryonic component
  • 110large intestine
  • 106skin of body
  • 91eye
  • 91stomach
  • 85adipose tissue
  • 72embryo
  • 71artery
  • 66small intestine
  • 59adrenal gland
  • 57placenta
  • 46ureter
  • 45mammary gland
  • 40thymus
  • 35esophagus
  • 35gonad
  • 34bone element
  • 34penis
  • 32spinal cord
  • 25spleen
  • 22nerve
  • 21prostate gland
  • 20lymphatic vessel
  • 19ovary
  • 19thyroid gland
  • 17skeleton
  • 16uterus
  • 15testis
  • 14bronchus
  • 14lymphoid tissue
  • 12bone marrow
  • 12mouth
  • 10breast
  • 9urinary bladder
  • 8tongue
  • 8vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1pericardium
Project
  • 6924AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 5ITG
  • 4community
Genome assembly (visualization)
  • 4002hg19
  • 1544GRCh38
  • 3hg18
biosample_type!
  • cell line
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

7626 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
chromatin state
accessible chromatin
candidate regulatory elements
gene expression
histone modifications
eQTL
binding sites
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart20215193112
kidney1416101472111
stomach2119319111
brain161821613211
primary cell
monocyte218158641121
CD8-positive, alpha-beta T cell514330
endothelial cell7153911222
common myeloid progenitor, CD34-positive141313
B cell1086112
in vitro differentiated cells
neural progenitor cell54104715
hematopoietic multipotent progenitor cell1010110111
adipocyte6642111
embryonic stem cell15611
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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