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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 49ChIP-seq
Assay category
  • 49DNA binding
Target of assay
  • 979histone modification
  • 978histone
  • 495narrow histone mark
  • 482broad histone mark
  • 260control
  • 153transcription factor
  • 49RNA binding protein
  • 6chromatin remodeller
  • 3other context
  • 3other post-translational modification
  • 2nucleotide modification
Date released
  • 11October, 2018
  • 8August, 2017
  • 5May, 2019
  • 5May, 2021
  • 5May, 2024
  • 4April, 2019
  • 4December, 2017
  • 4June, 2019
  • 3November, 2017
Available data
  • 43bigWig
  • 42bed narrowPeak
  • 39bam
  • 32bigBed narrowPeak
  • 26fastq
  • 5bed broadPeak
  • 5bigBed broadPeak
  • 2bed bed3+
Organism
  • 49Homo sapiens
Biosample type
  • cell line
  • 28tissue
  • 11in vitro differentiated cells
  • 10primary cell
Organ
  • 11heart
  • 10connective tissue
  • 8pancreas
  • 7epithelium
  • 5adipose tissue
  • 5vasculature
  • 4blood vessel
  • 4liver
  • 3brain
  • 3kidney
  • 1artery
  • 1eye
Project
  • 49AMP
Genome assembly (visualization)
  • 42GRCh38
  • 38hg19
Lab
  • 39AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
Audit category:
  • 3inconsistent ontology term
Audit category:
  • 1missing controlled_by
biosample_type!
  • cell line
BIOSAMPLE
ASSAY

49 results

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Clear Filters
ChIP-seq
tissue
body of pancreas5
left cardiac atrium5
heart left ventricle3
omental fat pad3
islet of Langerhans2
in vitro differentiated cells
embryonic stem cell5
adipocyte4
hepatocyte2
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
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