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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 153ChIP-seq
Assay category
  • 153DNA binding
Target of assay
  • 979histone modification
  • 978histone
  • 495narrow histone mark
  • 482broad histone mark
  • 260control
  • 153transcription factor
  • 49RNA binding protein
  • 6chromatin remodeller
  • 3other context
  • 3other post-translational modification
  • 2nucleotide modification
Date released
  • 47August, 2017
  • 42December, 2017
  • 16May, 2021
  • 15October, 2018
  • 7November, 2018
  • 6April, 2019
  • 5May, 2019
  • 5May, 2024
  • 4June, 2019
  • 3December, 2018
  • 3November, 2017
Available data
  • 140bigWig
  • 136bam
  • 117bed narrowPeak
  • 117fastq
  • 77bigBed narrowPeak
  • 19bed bed3+
  • 5bed broadPeak
  • 5bigBed broadPeak
  • 4tagAlign
Organism
  • 153Homo sapiens
Biosample type
  • cell line
  • 94tissue
  • 49in vitro differentiated cells
  • 10primary cell
Organ
  • 41liver
  • 40connective tissue
  • 18pancreas
  • 17adipose tissue
  • 13heart
  • 8epithelium
  • 6spleen
  • 5vasculature
  • 4blood vessel
  • 3brain
  • 3embryo
  • 3kidney
  • 1artery
  • 1eye
Project
  • 153AMP
Genome assembly (visualization)
  • 139GRCh38
  • 135hg19
Lab
  • 136AMP-T2D consortium
  • 12Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
Audit category:
  • 27inconsistent control
  • 6inconsistent ontology term
Audit category:
  • 23missing controlled_by
Audit category:
  • 10inconsistent control read length
biosample_type!
  • cell line
BIOSAMPLE
ASSAY

153 results

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Clear Filters
ChIP-seq
tissue
liver37
white adipose tissue12
body of pancreas9
islet of Langerhans7
spleen6
in vitro differentiated cells
adipocyte22
embryonic stem cell12
cardiomyocytes3
pancreatic endoderm3
Posterior foregut2
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
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