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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1151
candidate regulatory elements
855
target gene predictions
673
binding sites
666
histone modifications
644
chromatin state
350
accessible chromatin
128
gene expression
122
eQTL
74
Fine-mapped variants
53
variant allelic effects
15
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
other
2
sQTL
Date released
1875
February, 2021
1755
September, 2022
205
June, 2020
191
February, 2024
111
March, 2020
88
May, 2021
69
October, 2022
63
January, 2020
63
January, 2022
62
May, 2020
55
August, 2021
48
February, 2020
28
February, 2023
26
March, 2024
21
August, 2017
17
November, 2022
15
March, 2023
12
November, 2019
9
May, 2019
9
May, 2022
8
April, 2019
5
October, 2019
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
September, 2023
Available data
3776
bed bed3+
610
bed bed9
231
tsv
124
bigWig
31
bigBed bed9
7
bed bed9+
1
bam
Organism
4741
Homo sapiens
Biosample type
primary cell
2420
tissue
2318
cell line
in vitro differentiated cells
4
stem cell
Organ
427
brain
342
kidney
323
musculature of body
277
lung
intestine
243
limb
223
heart
209
bodily fluid
198
blood
168
large intestine
163
embryo
148
pancreas
127
connective tissue
108
stomach
104
epithelium
101
extraembryonic component
95
skin of body
95
vasculature
90
blood vessel
87
adipose tissue
86
liver
80
eye
80
small intestine
78
uterus
75
bone element
68
prostate gland
64
ureter
63
placenta
62
adrenal gland
62
lymph node
48
thymus
46
artery
46
gonad
39
spinal cord
38
mammary gland
35
esophagus
34
spleen
25
nerve
25
testis
24
lymphoid tissue
21
ovary
20
thyroid gland
18
skeleton
17
penis
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
3
vein
2
lymphatic vessel
Project
4729
AMP
9
community
5
ITG
1
T1D
Genome assembly (visualization)
4514
hg19
1039
GRCh38
4
hg18
biosample_type!
in vitro differentiated cells
primary cell
files.file_type!
bigBed narrowPeak
organ_slims!
intestine
BIOSAMPLE
TYPE
4744 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
chromatin state
accessible chromatin
gene expression
eQTL
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
other
sQTL
tissue
heart
37
20
1
1
21
5
3
2
stomach
40
21
1
19
3
1
1
kidney
29
14
1
2
16
10
7
1
1
brain
29
16
1
3
18
2
1
2
1
lung
33
17
16
1
1
+ See 241 more…
cell line
HeLa-S3
5
55
1
3
A549
21
19
2
1
18
1
H1-hESC
1
39
2
1
1
1
8
K562
7
23
2
1
7
1
MCF-7
9
6
3
2
5
1
+ See 758 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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