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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
237
ChIP-seq
5
MeRIP-seq
Assay category
237
DNA binding
Target of assay
544
histone
544
histone modification
432
transcription factor
294
narrow histone mark
250
broad histone mark
242
control
91
RNA binding protein
89
recombinant protein
32
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
68
November, 2017
36
October, 2019
August, 2017
29
October, 2018
23
May, 2020
22
May, 2019
14
April, 2019
13
December, 2017
6
November, 2018
6
September, 2017
5
November, 2020
4
August, 2021
4
December, 2018
4
January, 2019
3
February, 2021
3
October, 2017
2
November, 2019
Available data
232
bam
118
fastq
48
tagAlign
13
bigWig
3
bed bed3+
Organism
242
Homo sapiens
Biosample type
158
tissue
83
cell line
in vitro differentiated cells
primary cell
1
stem cell
Organ
95
liver
31
pancreas
25
brain
18
adipose tissue
18
blood vessel
18
connective tissue
18
heart
18
vasculature
17
limb
11
nerve
9
artery
9
kidney
8
spleen
6
blood
6
bodily fluid
5
epithelium
1
musculature of body
Project
242
AMP
Genome assembly (visualization)
16
hg19
3
GRCh38
Lab
233
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
4
Bing Ren, UCSD
Audit category:
8
inconsistent ontology term
biosample_type!
in vitro differentiated cells
primary cell
month_released!
August, 2017
BIOSAMPLE
ASSAY
242 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
liver
32
tibial nerve
11
subcutaneous adipose tissue
10
body of pancreas
9
islet of Langerhans
6
2
+ See 35 more…
cell line
HepG2
60
GM12878
6
Panc1
6
EndoC_BH1
2
3
smooth muscle cell of the coronary artery
2
+ See 4 more…
stem cell
hESC
1
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