Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
26
accessible chromatin
24
candidate regulatory elements
21
gene expression
20
target gene predictions
17
chromatin state
15
eQTL
5
Fine-mapped variants
4
binding sites
3
differential activity
3
histone modifications
2
sQTL
2
variant to gene
Date released
40
September, 2022
24
February, 2021
21
May, 2021
10
February, 2024
9
March, 2020
8
August, 2021
8
March, 2023
May, 2020
4
January, 2020
4
January, 2022
3
August, 2017
3
June, 2020
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
October, 2019
Available data
83
bed bed3+
26
tsv
15
bigWig
13
bed bed9
2
bigBed bed9
Organism
142
Homo sapiens
Biosample type
primary cell
109
tissue
33
cell line
in vitro differentiated cells
Organ
415
brain
329
kidney
319
musculature of body
277
lung
266
intestine
233
limb
212
heart
209
bodily fluid
198
blood
168
large intestine
163
embryo
142
pancreas
124
connective tissue
108
stomach
102
epithelium
101
extraembryonic component
95
skin of body
88
vasculature
86
liver
84
adipose tissue
83
blood vessel
80
small intestine
79
eye
78
uterus
75
bone element
68
prostate gland
63
placenta
62
adrenal gland
62
lymph node
61
ureter
47
thymus
46
gonad
41
artery
39
spinal cord
38
mammary gland
35
esophagus
34
spleen
25
testis
24
lymphoid tissue
22
nerve
21
ovary
20
thyroid gland
18
skeleton
17
penis
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
3
vein
2
lymphatic vessel
0
pericardium
Project
140
AMP
2
community
Genome assembly (visualization)
108
hg19
36
GRCh38
biosample_type!
in vitro differentiated cells
primary cell
month_released!
May, 2020
BIOSAMPLE
TYPE
142 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
eQTL
Fine-mapped variants
binding sites
differential activity
histone modifications
sQTL
variant to gene
tissue
islet of Langerhans
4
11
1
3
13
2
2
1
2
2
body of pancreas
8
2
5
4
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
7
4
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
1
3
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
See all biosamples
Download