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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1228
candidate regulatory elements
904
target gene predictions
689
chromatin state
669
histone modifications
667
binding sites
350
accessible chromatin
129
gene expression
122
eQTL
74
Fine-mapped variants
53
variant allelic effects
15
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
other
2
sQTL
Date released
1909
February, 2021
1877
September, 2022
205
June, 2020
194
February, 2024
112
March, 2020
93
May, 2021
68
October, 2022
63
January, 2020
63
January, 2022
62
May, 2020
55
August, 2021
48
February, 2020
28
February, 2023
27
March, 2024
25
August, 2017
17
November, 2022
15
March, 2023
12
November, 2019
9
May, 2019
9
May, 2022
8
April, 2019
5
October, 2019
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
September, 2023
Available data
3903
bed bed3+
651
bed bed9
232
tsv
124
bigWig
31
bigBed bed9
7
bed bed9+
1
bam
Organism
4910
Homo sapiens
Biosample type
2617
tissue
primary cell
2290
cell line
in vitro differentiated cells
4
stem cell
Organ
427
brain
342
kidney
323
musculature of body
277
lung
266
intestine
243
limb
223
heart
209
bodily fluid
198
blood
168
large intestine
163
embryo
148
pancreas
127
connective tissue
108
stomach
104
epithelium
101
extraembryonic component
95
skin of body
95
vasculature
90
blood vessel
87
adipose tissue
86
liver
80
eye
80
small intestine
78
uterus
75
bone element
68
prostate gland
64
ureter
63
placenta
62
adrenal gland
lymph node
48
thymus
46
artery
46
gonad
39
spinal cord
38
mammary gland
esophagus
34
spleen
25
nerve
25
testis
24
lymphoid tissue
21
ovary
20
thyroid gland
18
skeleton
17
penis
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
3
vein
2
lymphatic vessel
Project
4898
AMP
9
community
5
ITG
1
T1D
Genome assembly (visualization)
4682
hg19
1082
GRCh38
4
hg18
biosample_type!
in vitro differentiated cells
primary cell
organ_slims!
esophagus
lymph node
BIOSAMPLE
TYPE
4913 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
binding sites
accessible chromatin
gene expression
eQTL
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
other
sQTL
tissue
heart
37
20
21
1
1
5
3
2
stomach
40
21
19
1
3
1
1
kidney
29
14
16
2
1
10
7
1
1
brain
29
16
18
3
1
2
1
2
1
lung
33
17
16
1
1
+ See 255 more…
cell line
HeLa-S3
5
55
3
1
A549
21
19
18
1
2
1
H1-hESC
1
39
1
1
2
1
8
K562
7
23
7
1
2
1
MCF-7
9
6
5
2
3
1
+ See 752 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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