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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
104
ChIP-seq
Assay category
104
DNA binding
Target of assay
199
histone
199
histone modification
104
broad histone mark
95
narrow histone mark
30
control
17
transcription factor
6
RNA binding protein
5
nucleotide modification
Date released
52
August, 2017
22
May, 2021
20
May, 2024
5
October, 2017
4
November, 2017
1
August, 2021
Available data
390
bigWig
383
bed narrowPeak
bam
235
bigBed narrowPeak
133
tagAlign
87
fastq
36
bed broadPeak
16
bigBed broadPeak
8
bed bed3+
Organism
104
Homo sapiens
Biosample type
81
tissue
22
primary cell
in vitro differentiated cells
1
cell line
Organ
20
adipose tissue
20
connective tissue
20
heart
13
liver
12
musculature of body
9
brain
8
pancreas
Project
104
AMP
Genome assembly (visualization)
33
hg19
20
GRCh38
Lab
63
AMP-T2D consortium
20
Kyle Gaulton, UCSD
20
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
1
missing controlled_by
biosample_type!
in vitro differentiated cells
files.file_type!
bam
xls
organ_slims!
thymus
BIOSAMPLE
ASSAY
104 results
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Clear Filters
ChIP-seq
tissue
left cardiac atrium
20
subcutaneous abdominal adipose tissue
20
liver
12
skeletal muscle tissue
12
islet of Langerhans
8
+ See 3 more…
primary cell
CD8-positive, alpha-beta T cell
20
naive thymus-derived CD4-positive, alpha-beta T cell
1
neutrophil
1
cell line
HepG2
1
See all biosamples
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