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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
2
WGBS
1
ATAC-seq
1
pCHi-C
Assay category
7
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
7
control
Date released
5
November, 2018
4
December, 2018
January, 2019
1
March, 2020
1
October, 2017
Available data
17
bam
17
fastq
10
bigWig
8
bed narrowPeak
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
11
Homo sapiens
Biosample type
11
tissue
Organ
846
pancreas
562
connective tissue
480
adipose tissue
438
epithelium
427
liver
298
heart
188
kidney
159
brain
153
vasculature
151
blood vessel
116
artery
71
bone element
55
eye
48
musculature of body
38
limb
20
lung
17
nerve
12
blood
12
bodily fluid
12
skeleton
11
spleen
9
vein
8
embryo
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
11
AMP
Genome assembly (visualization)
3
GRCh38
1
hg19
Lab
11
AMP-T2D consortium
biosample_type!
in vitro differentiated cells
files.file_type!
bigBed narrowPeak
txt
month_released!
January, 2019
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
WGBS
ATAC-seq
pCHi-C
tissue
spleen
7
2
1
1
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