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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
17
ChIP-seq
17
pCHi-C
2
total RNA-seq
1
DNAme array
Assay category
29
DNA accessibility
17
DNA binding
2
Transcription
1
DNA methylation
Target of assay
13
control
4
histone
4
histone modification
2
broad histone mark
2
narrow histone mark
Date released
252
August, 2021
189
February, 2023
180
May, 2022
160
February, 2021
119
August, 2017
92
October, 2019
81
May, 2020
72
November, 2017
56
September, 2020
53
May, 2021
47
September, 2023
38
March, 2020
29
October, 2018
25
November, 2019
24
February, 2020
23
July, 2019
23
May, 2019
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
13
December, 2017
11
November, 2020
9
October, 2017
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
3
December, 2019
1
August, 2022
1
September, 2018
Available data
bigWig
243
bam
166
bed narrowPeak
94
tsv
84
tagAlign
51
fastq
36
bigBed narrowPeak
5
bed bed3+
Organism
66
Homo sapiens
Biosample type
in vitro differentiated cells
35
primary cell
16
cell line
14
tissue
1
stem cell
Organ
17
pancreas
16
epithelium
12
liver
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
49
AMP
17
T1D
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
48
AMP-T2D consortium
18
Kyle Gaulton, UCSD
Audit category:
17
inconsistent ontology term
biosample_type!
in vitro differentiated cells
files.file_type!
bigWig
organ_slims!
nerve
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ATAC-seq
ChIP-seq
pCHi-C
total RNA-seq
DNAme array
primary cell
monocyte
13
1
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
B cell
1
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cell line
EndoC_BH1
16
tissue
liver
9
right lobe of liver
3
pancreas
1
thymus
1
stem cell
hESC
1
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