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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1630candidate regulatory elements
  • 1289target gene predictions
  • 898chromatin state
  • 883histone modifications
  • 779binding sites
  • 606gene expression
  • 328accessible chromatin
  • 189eQTL
  • 172differential activity
  • 131variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
Date released
  • 2639February, 2025
  • 2402September, 2022
  • 2387February, 2021
  • 337May, 2021
  • 308February, 2024
  • 282September, 2023
  • 268June, 2020
  • 118March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101October, 2022
  • 95May, 2020
  • 77August, 2021
  • 70March, 2023
  • 64February, 2020
  • 42May, 2022
  • 40May, 2024
  • 38March, 2025
  • 31August, 2017
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 17November, 2022
  • 13February, 2023
  • 9August, 2018
  • 8April, 2019
  • 7May, 2019
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 5737bed bed3+
  • 3501tsv
  • 829bed bed9
  • bigWig
  • 108txt
  • 35bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 9660Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2394EpiMap
  • 1709ChIP-Atlas
  • 919ENCODE
  • 538DGA
  • 380T1D
  • 281KPMP
  • 206BLUEPRINT
  • 202AMP
  • 1744DN
  • 151GTEx
  • 147T2DKP
  • 145 T2DKP
  • 104T2D
  • 101eQTLCatalogue
  • 55HPAP
  • 48CMDGA
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5203tissue
  • 2348cell line
  • 2107primary cell
  • in vitro differentiated cells
  • 4stem cell
Organ
  • 2880vasculature
  • 2859bodily fluid
  • 2848blood
  • 2825blood vessel
  • 2657vein
  • 758epithelium
  • 615kidney
  • 443brain
  • 377connective tissue
  • 362musculature of body
  • 302lung
  • 278intestine
  • 234heart
  • 230limb
  • 217pancreas
  • 190skin of body
  • 183embryo
  • 171large intestine
  • 138extraembryonic component
  • 133liver
  • 114stomach
  • 93adipose tissue
  • 82small intestine
  • 82uterus
  • 81mammary gland
  • 79bone element
  • 78prostate gland
  • 71placenta
  • 70artery
  • 69eye
  • 67adrenal gland
  • 62lymph node
  • 61ureter
  • 58penis
  • 49gonad
  • 48thymus
  • 43esophagus
  • 43spinal cord
  • 33spleen
  • 26testis
  • 24lymphoid tissue
  • 23nerve
  • 22ovary
  • 22thyroid gland
  • 19lymphatic vessel
  • 19mouth
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 11bone marrow
  • 10skeleton
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 1pericardium
Project
  • 9222AMP
  • 281KPMP
  • 111ENCODE
  • 32T1D
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6090hg19
  • 1469GRCh38
  • 4hg18
biosample_type!
  • in vitro differentiated cells
files.file_type!
  • bigWig
BIOSAMPLE
TYPE

9664 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
binding sites
gene expression
accessible chromatin
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
tissue
whole blood26351
heart37202111322
stomach4021191131
brain291618311121
kidney291415217111
cell line
HeLa-S355531
A549211918121
H1-hESC13911281
K5627237121
MCF-7965231
primary cell
monocyte28611524121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell751303
B cell171082
CD4-positive, alpha-beta memory T cell1499
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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