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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
8
DNase-seq
5
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
64
DNA binding
9
DNA accessibility
5
DNA methylation
1
Transcription
Target of assay
61
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
3
control
Date released
683
February, 2021
406
November, 2017
343
August, 2017
341
May, 2020
277
August, 2021
267
May, 2021
236
October, 2019
200
May, 2022
189
February, 2023
186
June, 2019
168
July, 2018
113
May, 2019
99
July, 2019
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
59
September, 2020
56
November, 2019
55
March, 2020
51
December, 2017
49
April, 2018
47
September, 2023
40
May, 2024
28
December, 2018
23
January, 2019
22
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
December, 2019
7
August, 2020
5
March, 2019
5
March, 2023
4
January, 2018
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
79
fastq
78
bam
74
bigWig
69
bed narrowPeak
69
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
5
bed bedMethyl
5
bigBed bedMethyl
1
csv
Organism
79
Homo sapiens
Biosample type
61
cell line
17
tissue
1
primary cell
Organ
53
liver
15
blood
15
bodily fluid
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
79
AMP
Genome assembly (visualization)
73
GRCh38
67
hg19
Lab
79
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
biosample_type!
in vitro differentiated cells
files.file_type!
hdf5
organ_slims!
limb
spleen
BIOSAMPLE
ASSAY
79 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
45
1
GM12878
15
tissue
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
omental fat pad
1
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primary cell
pancreatic cell
1
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