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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
34
ChIP-seq
11
total RNA-seq
Assay category
187
DNA accessibility
34
DNA binding
11
Transcription
Target of assay
22
histone
22
histone modification
14
narrow histone mark
8
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
550
February, 2021
392
November, 2017
283
May, 2020
246
October, 2019
228
August, 2017
218
June, 2019
192
May, 2021
164
July, 2018
120
May, 2019
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
54
November, 2019
51
December, 2017
49
April, 2018
34
December, 2018
30
January, 2019
24
May, 2022
15
October, 2017
14
March, 2020
12
August, 2021
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
232
bam
228
bigWig
213
bed narrowPeak
210
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
41
tsv
8
bedpe bed3+
8
hic
Organism
232
Homo sapiens
Biosample type
172
tissue
55
primary cell
5
cell line
in vitro differentiated cells
Organ
81
kidney
45
musculature of body
37
heart
32
limb
30
brain
23
epithelium
18
connective tissue
18
ureter
10
pancreas
8
vasculature
7
eye
6
blood vessel
3
liver
2
artery
1
adipose tissue
Project
227
AMP
5
T1D
Genome assembly (visualization)
224
GRCh38
201
hg19
Lab
232
AMP-T2D consortium
Audit category:
29
inconsistent ontology term
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
232 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 38 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 17 more…
cell line
EndoC_BH1
1
2
early embryonic cell
2
See all biosamples
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