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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
1
DNase-seq
Assay category
65
DNA binding
1
DNA accessibility
Target of assay
49
histone
49
histone modification
28
broad histone mark
21
narrow histone mark
15
transcription factor
4
RNA binding protein
1
chromatin remodeller
1
control
Date released
187
June, 2019
70
November, 2017
66
August, 2017
10
October, 2019
9
November, 2018
4
July, 2019
4
October, 2017
3
August, 2021
3
December, 2017
2
February, 2021
2
May, 2021
2
September, 2017
1
March, 2019
1
May, 2022
1
November, 2020
Available data
233
fastq
228
bam
224
bigWig
99
bed narrowPeak
89
tsv
71
tagAlign
41
bigBed narrowPeak
40
bed broadPeak
26
bed bed3+
14
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
60
Homo sapiens
Biosample type
52
tissue
14
primary cell
in vitro differentiated cells
Organ
31
pancreas
13
musculature of body
5
adipose tissue
5
connective tissue
3
liver
Project
66
AMP
Genome assembly (visualization)
66
hg19
44
GRCh38
Lab
66
AMP-T2D consortium
Audit category:
14
missing controlled_by
Audit category:
2
inconsistent assembly
biosample_type!
in vitro differentiated cells
organ_slims!
pericardium
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
DNase-seq
tissue
islet of Langerhans
25
skeletal muscle tissue
13
pancreas
6
white adipose tissue
4
liver
3
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primary cell
skeletal muscle myoblast
13
1
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