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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1521
candidate regulatory elements
1226
target gene predictions
856
histone modifications
828
accessible chromatin
729
binding sites
118
variant allelic effects
34
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2153
February, 2021
1542
September, 2022
333
November, 2021
264
February, 2024
258
May, 2021
254
June, 2020
128
May, 2020
80
October, 2022
63
January, 2020
56
January, 2021
37
March, 2020
31
February, 2023
29
August, 2021
28
August, 2017
26
November, 2022
19
April, 2020
15
May, 2022
11
November, 2019
7
October, 2019
3
September, 2018
2
January, 2022
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
1
September, 2023
Available data
5347
bed bed3+
824
tsv
796
bed bed9
534
bigWig
108
txt
35
bigBed bed9
34
bed bed9+
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5301
Homo sapiens
Biosample type
1942
cell line
1848
tissue
1551
primary cell
in vitro differentiated cells
4
stem cell
Organ
530
epithelium
308
kidney
306
brain
286
connective tissue
279
musculature of body
239
lung
228
intestine
190
bodily fluid
blood
175
limb
173
heart
161
vasculature
159
pancreas
156
embryo
156
skin of body
137
large intestine
123
blood vessel
108
extraembryonic component
98
liver
93
stomach
92
eye
76
uterus
70
bone element
70
mammary gland
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
51
ureter
48
adipose tissue
penis
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
12
lymphatic vessel
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
Project
4934
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5339
hg19
742
GRCh38
1
hg18
biosample_type!
in vitro differentiated cells
organ_slims!
blood
penis
BIOSAMPLE
TYPE
5347 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
MCF-7
9
6
2
1
3
breast cancer cell
11
9
+ See 730 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 216 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 324 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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