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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
single cell RNA-seq
7
ATAC-seq
Assay category
8
Transcription
7
DNA accessibility
Date released
8
February, 2021
5
February, 2023
1
November, 2018
1
September, 2018
Available data
3096
bam
2905
bigWig
1680
bed narrowPeak
1469
tsv
1212
fastq
1020
bigBed narrowPeak
358
tagAlign
320
bed broadPeak
283
bigBed broadPeak
248
bed bed3+
158
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
19
hic
16
bedpe bed3+
8
csv
7
bed bed3
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
15
Homo sapiens
Biosample type
11
tissue
in vitro differentiated cells
3
primary cell
1
cell line
Organ
5
kidney
4
bone element
4
skeleton
2
liver
1
brain
1
connective tissue
Project
15
AMP
Genome assembly (visualization)
7
hg19
2
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
5
audit script error
1
inconsistent replicate
biosample_type!
in vitro differentiated cells
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
15 results
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single cell RNA-seq
ATAC-seq
tissue
kidney
5
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
+ See 2 more…
primary cell
pancreatic cell
2
osteoblast
1
cell line
HepG2
1
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