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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
Assay category
7
DNA accessibility
Date released
5
February, 2023
2
February, 2021
Available data
2352
bam
2099
bigWig
1448
tsv
1053
fastq
891
bed narrowPeak
646
bigBed narrowPeak
256
bed broadPeak
254
bigBed broadPeak
231
bed bed3+
158
txt
153
zippedFastqFolder
64
xls
63
tagAlign
36
bed bedMethyl
36
bigBed bedMethyl
17
hic
14
bedpe bed3+
8
csv
7
bed bed3
5
hdf5
4
tar
3
cool
1
bedpe
1
vcf
Organism
7
Homo sapiens
Biosample type
in vitro differentiated cells
5
tissue
1
cell line
1
primary cell
Organ
4
bone element
4
skeleton
1
brain
1
connective tissue
1
liver
Project
7
AMP
Genome assembly (visualization)
7
hg19
2
GRCh38
Lab
7
AMP-T2D consortium
Audit category:
1
inconsistent replicate
biosample_type!
in vitro differentiated cells
month_released!
November, 2019
organ_slims!
urinary bladder
target.investigated_as!
histone
BIOSAMPLE
ASSAY
7 results
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ATAC-seq
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
cell line
HepG2
1
primary cell
osteoblast
1
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