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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
15
WGBS
Assay category
34
DNA methylation
Date released
23
July, 2019
6
August, 2017
5
November, 2018
Available data
3069
bam
2886
bigWig
1671
bed narrowPeak
1460
tsv
1193
fastq
1012
bigBed narrowPeak
358
tagAlign
320
bed broadPeak
283
bigBed broadPeak
247
bed bed3+
158
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
19
hic
16
bedpe bed3+
8
csv
7
bed bed3
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
34
Homo sapiens
Biosample type
23
tissue
10
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
34
AMP
Genome assembly (visualization)
19
hg19
15
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
in vitro differentiated cells
files.file_type!
ibed
organ_slims!
embryo
spleen
BIOSAMPLE
ASSAY
34 results
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Clear Filters
RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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