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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
WGBS
4
RRBS
Assay category
13
DNA methylation
Date released
July, 2019
7
November, 2018
6
August, 2017
Available data
3019
bam
2804
bigWig
1658
bed narrowPeak
1404
tsv
1216
fastq
1023
bigBed narrowPeak
358
tagAlign
320
bed broadPeak
284
bigBed broadPeak
244
bed bed3+
158
txt
153
zippedFastqFolder
64
xls
19
hic
16
bedpe bed3+
13
bed bedMethyl
13
bigBed bedMethyl
8
csv
7
bed bed3
4
tar
3
cool
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
13
Homo sapiens
Biosample type
11
tissue
1
cell line
1
primary cell
Organ
4
pancreas
2
adipose tissue
2
connective tissue
2
liver
2
musculature of body
2
spleen
Project
13
AMP
Genome assembly (visualization)
9
GRCh38
4
hg19
Lab
13
AMP-T2D consortium
biosample_type!
in vitro differentiated cells
lab.title!
Karen Mohlke, UNC
Stephen Parker, UMich
month_released!
July, 2019
BIOSAMPLE
ASSAY
13 results
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WGBS
RRBS
tissue
adipose tissue
2
body of pancreas
2
pancreas
2
skeletal muscle tissue
2
spleen
2
+ See 1 more…
cell line
HepG2
1
primary cell
skeletal muscle myoblast
1
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