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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
83
ATAC-seq
Assay category
106
DNA binding
83
DNA accessibility
Target of assay
90
histone
90
histone modification
53
broad histone mark
37
narrow histone mark
16
transcription factor
6
RNA binding protein
Date released
63
February, 2023
40
May, 2024
30
May, 2021
20
August, 2017
20
May, 2022
14
August, 2021
1
April, 2019
1
November, 2017
Available data
bam
2779
bigWig
1502
bed narrowPeak
1445
tsv
1217
fastq
921
bigBed narrowPeak
358
tagAlign
243
bed broadPeak
206
bigBed broadPeak
170
bed bed3+
153
zippedFastqFolder
95
txt
32
bed bedMethyl
32
bigBed bedMethyl
15
hic
13
bedpe bed3+
7
bed bed3
5
hdf5
4
tar
3
csv
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
189
Homo sapiens
Biosample type
145
tissue
30
primary cell
14
cell line
in vitro differentiated cells
Organ
76
heart
kidney
35
artery
35
blood vessel
35
vasculature
34
liver
27
eye
13
musculature of body
12
epithelium
6
pancreas
2
adipose tissue
2
connective tissue
1
brain
Project
189
AMP
Genome assembly (visualization)
114
hg19
75
GRCh38
Lab
85
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
30
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
14
Bing Ren, UCSD
biosample_type!
in vitro differentiated cells
files.file_type!
bam
month_released!
October, 2022
organ_slims!
kidney
BIOSAMPLE
ASSAY
189 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
left cardiac atrium
40
coronary artery
35
liver
20
retina
15
skeletal muscle tissue
13
+ See 6 more…
primary cell
CD8-positive, alpha-beta T cell
30
cell line
HepG2
14
See all biosamples
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