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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
383
ChIP-seq
Assay category
383
DNA binding
Target of assay
773
histone modification
772
histone
437
transcription factor
389
narrow histone mark
383
broad histone mark
99
RNA binding protein
88
recombinant protein
33
chromatin remodeller
5
other context
5
other post-translational modification
Date released
64
May, 2021
58
May, 2019
50
October, 2019
45
November, 2017
44
August, 2017
37
April, 2019
20
May, 2024
19
October, 2018
17
September, 2018
8
June, 2019
6
November, 2019
5
October, 2017
4
December, 2017
4
January, 2019
2
August, 2021
Available data
390
bigWig
383
bed narrowPeak
341
bam
235
bigBed narrowPeak
133
tagAlign
87
fastq
36
bed broadPeak
16
bigBed broadPeak
8
bed bed3+
Organism
379
Homo sapiens
Biosample type
253
tissue
112
primary cell
in vitro differentiated cells
17
cell line
1
stem cell
Organ
68
pancreas
61
brain
57
heart
41
blood vessel
41
vasculature
34
limb
33
epithelium
22
liver
16
musculature of body
16
nerve
15
kidney
14
artery
5
vein
4
connective tissue
4
spleen
Project
339
AMP
44
T1D
Genome assembly (visualization)
350
GRCh38
327
hg19
Lab
298
AMP-T2D consortium
64
Kyle Gaulton, UCSD
20
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
14
inconsistent ontology term
Audit category:
19
missing controlled_by
Audit category:
9
inconsistent control read length
2
inconsistent assembly
biosample_type!
in vitro differentiated cells
organ_slims!
thymus
BIOSAMPLE
ASSAY
383 results
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Clear Filters
ChIP-seq
tissue
left cardiac atrium
20
tibial nerve
16
heart left ventricle
15
tibial artery
14
body of pancreas
11
+ See 25 more…
primary cell
monocyte
44
CD8-positive, alpha-beta T cell
20
pancreatic endocrine cell
7
pancreatic ductal cell
6
skeletal muscle myoblast
6
+ See 9 more…
cell line
HepG2
8
EndoC_BH1
6
Panc1
3
stem cell
hESC
1
See all biosamples
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