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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
14
WGBS
1
ChIP-seq
Assay category
33
DNA methylation
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
22
July, 2019
6
August, 2017
5
November, 2018
1
October, 2019
Available data
2963
bam
2803
bigWig
1579
bed narrowPeak
1461
tsv
1193
fastq
928
bigBed narrowPeak
358
tagAlign
284
bed broadPeak
247
bigBed broadPeak
211
bed bed3+
158
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
19
hic
16
bedpe bed3+
8
csv
7
bed bed3
5
hdf5
4
tar
3
cool
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
34
Homo sapiens
Biosample type
23
tissue
10
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
brain
3
connective tissue
3
liver
2
adipose tissue
spleen
2
vasculature
1
blood vessel
1
eye
limb
1
pericardium
Project
34
AMP
Genome assembly (visualization)
20
hg19
15
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
in vitro differentiated cells
organ_slims!
limb
spleen
BIOSAMPLE
ASSAY
34 results
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Clear Filters
RRBS
WGBS
ChIP-seq
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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