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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
WGBS
15
RRBS
Assay category
32
DNA methylation
Date released
19
July, 2019
7
November, 2018
6
August, 2017
Available data
2957
bam
2778
bigWig
1502
bed narrowPeak
1445
tsv
1216
fastq
921
bigBed narrowPeak
358
tagAlign
242
bed broadPeak
206
bigBed broadPeak
170
bed bed3+
153
zippedFastqFolder
96
txt
32
bed bedMethyl
32
bigBed bedMethyl
18
hic
16
bedpe bed3+
7
bed bed3
5
hdf5
4
tar
3
cool
3
csv
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
32
Homo sapiens
Biosample type
24
tissue
7
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
32
AMP
Genome assembly (visualization)
17
GRCh38
15
hg19
Lab
32
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
in vitro differentiated cells
lab.title!
Stephen Parker, UMich
organ_slims!
kidney
BIOSAMPLE
ASSAY
32 results
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Clear Filters
WGBS
RRBS
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
retinal pigment epithelial cell
1
+ See 2 more…
cell line
HepG2
1
See all biosamples
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