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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
51
DNA binding
10
DNA accessibility
7
DNA methylation
Target of assay
51
transcription factor
19
RNA binding protein
15
recombinant protein
5
chromatin remodeller
3
other context
3
other post-translational modification
Date released
529
February, 2021
334
November, 2017
260
May, 2020
224
August, 2017
214
May, 2021
210
June, 2019
203
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
72
September, 2018
68
November, 2018
65
April, 2019
49
April, 2018
47
October, 2018
40
May, 2024
38
December, 2017
31
November, 2019
25
August, 2021
18
March, 2020
14
October, 2017
11
January, 2019
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
December, 2018
3
January, 2018
3
June, 2018
3
September, 2020
Available data
73
fastq
72
bam
68
bigWig
61
bed narrowPeak
61
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
68
Homo sapiens
Biosample type
45
cell line
23
tissue
Organ
52
liver
blood
12
bodily fluid
7
pancreas
6
spleen
2
brain
1
adipose tissue
1
connective tissue
Project
68
AMP
Genome assembly (visualization)
67
GRCh38
59
hg19
Lab
68
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
biosample_type!
in vitro differentiated cells
lab.title!
Karen Mohlke, UNC
organ_slims!
blood
BIOSAMPLE
ASSAY
68 results
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ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
44
1
tissue
liver
4
2
spleen
3
1
2
body of pancreas
2
2
pancreas
2
1
brain
2
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