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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
523
total RNA-seq
5
ChIP-seq
1
ATAC-seq
Assay category
523
Transcription
5
DNA binding
1
DNA accessibility
Target of assay
5
transcription factor
Date released
529
February, 2021
268
November, 2017
260
May, 2020
224
August, 2017
214
May, 2021
180
June, 2019
164
July, 2018
127
October, 2019
78
November, 2018
72
May, 2019
72
September, 2018
69
July, 2019
65
April, 2019
49
April, 2018
47
October, 2018
40
May, 2024
38
December, 2017
31
November, 2019
30
December, 2018
26
January, 2019
25
August, 2021
20
May, 2022
18
March, 2020
7
August, 2020
7
October, 2017
5
December, 2019
5
November, 2020
5
September, 2017
4
January, 2018
3
August, 2018
3
June, 2018
3
September, 2020
Available data
550
bam
537
tsv
529
bigWig
89
txt
45
fastq
23
bed narrowPeak
8
tagAlign
6
csv
2
bed bed3
2
bed bed3+
Organism
529
Homo sapiens
Biosample type
444
tissue
83
cell line
in vitro differentiated cells
2
primary cell
Organ
446
connective tissue
386
adipose tissue
58
bone element
56
artery
56
blood vessel
56
heart
56
vasculature
26
epithelium
26
pancreas
Project
529
AMP
Genome assembly (visualization)
529
GRCh38
529
hg19
Lab
529
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
biosample_type!
in vitro differentiated cells
month_released!
February, 2020
organ_slims!
brain
BIOSAMPLE
ASSAY
529 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
tissue
adipose tissue
381
bone tissue
58
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
cell line
smooth muscle cell of the coronary artery
52
4
EndoC_BH1
26
iPSC derived cell line
1
primary cell
osteoblast
1
1
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