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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
ChIP-seq
Assay category
98
DNA binding
Target of assay
56
control
42
histone
42
histone modification
25
broad histone mark
17
narrow histone mark
Date released
33
August, 2017
23
May, 2020
21
November, 2017
9
October, 2019
8
October, 2017
3
February, 2021
1
August, 2021
Available data
3068
bam
bigWig
1638
bed narrowPeak
1459
tsv
1184
fastq
992
bigBed narrowPeak
358
tagAlign
316
bed broadPeak
279
bigBed broadPeak
248
bed bed3+
158
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
17
hic
14
bedpe bed3+
8
csv
7
bed bed3
5
hdf5
4
tar
3
cool
1
tagAlign bed3+
Organism
97
Homo sapiens
Biosample type
94
tissue
in vitro differentiated cells
3
cell line
1
primary cell
Organ
44
liver
36
brain
7
adipose tissue
7
connective tissue
4
pancreas
2
artery
2
blood vessel
2
heart
2
musculature of body
2
vasculature
1
epithelium
Project
98
AMP
Genome assembly (visualization)
1
GRCh38
Lab
98
AMP-T2D consortium
Audit category:
1
missing controlled_by
biosample_type!
in vitro differentiated cells
files.file_type!
bigWig
lab.title!
Bing Ren, UCSD
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
98 results
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Clear Filters
ChIP-seq
tissue
liver
43
brain
8
cingulate gyrus
8
subcutaneous abdominal adipose tissue
7
layer of hippocampus
4
+ See 15 more…
cell line
smooth muscle cell of the coronary artery
2
iPSC derived cell line
1
primary cell
hepatocyte
1
See all biosamples
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