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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 74ChIP-seq
  • 1DNase-seq
Assay category
  • 74DNA binding
  • 1DNA accessibility
Target of assay
  • 46transcription factor
  • 14control
  • 14histone
  • 14histone modification
  • 9RNA binding protein
  • 8narrow histone mark
  • 6broad histone mark
  • 1chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 58November, 2017
  • 13August, 2017
  • 2October, 2018
  • 2September, 2017
Available data
  • 75bam
  • 75fastq
  • 71bigWig
  • 61bed narrowPeak
  • 52bigBed narrowPeak
  • 12bed bed3+
  • 9bed broadPeak
  • 8bigBed broadPeak
  • 3tar
  • 1tagAlign
Organism
  • 74Homo sapiens
Biosample type
  • 51cell line
  • in vitro differentiated cells
  • 16tissue
  • 8primary cell
Organ
  • 53liver
  • 14pancreas
  • 7brain
  • 4epithelium
  • 4vasculature
  • 2blood vessel
Project
  • 75AMP
Genome assembly (visualization)
  • 74hg19
  • 43GRCh38
Lab
  • 75AMP-T2D consortium
Audit category:
  • 6missing controlled_by
biosample_type!
  • in vitro differentiated cells
BIOSAMPLE
ASSAY

75 results

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Clear Filters
ChIP-seq
DNase-seq
cell line
HepG251
tissue
islet of Langerhans101
pancreas3
liver2
primary cell
astrocyte of the cerebellum3
brain microvascular endothelial cell2
choroid plexus epithelial cell2
skeletal muscle myoblast1
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