Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
104
ChIP-seq
4
RRBS
1
DNase-seq
Assay category
104
DNA binding
4
DNA methylation
1
DNA accessibility
Target of assay
52
transcription factor
31
histone
31
histone modification
21
control
16
broad histone mark
15
narrow histone mark
7
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
59
November, 2017
43
August, 2017
3
December, 2017
2
November, 2018
1
January, 2019
1
October, 2017
Available data
109
fastq
104
bam
88
bigWig
78
bed narrowPeak
64
bigBed narrowPeak
53
bed broadPeak
53
bigBed broadPeak
16
tagAlign
4
bed bedMethyl
4
bigBed bedMethyl
3
bed bed3+
Organism
109
Homo sapiens
Biosample type
62
cell line
37
primary cell
in vitro differentiated cells
10
tissue
Organ
65
liver
29
pancreas
26
epithelium
2
musculature of body
1
blood
1
bodily fluid
1
brain
Project
109
AMP
Genome assembly (visualization)
92
hg19
72
GRCh38
Lab
109
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
12
inconsistent control read length
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
109 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
RRBS
DNase-seq
cell line
HepG2
61
GM12878
1
primary cell
pancreatic alpha cell
13
pancreatic beta cell
13
skeletal muscle myoblast
9
1
1
tissue
liver
3
1
islet of Langerhans
3
skeletal muscle tissue
2
brain
1
Download