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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
54
total RNA-seq
17
pCHi-C
Assay category
117
DNA binding
54
Transcription
Target of assay
114
histone
114
histone modification
64
broad histone mark
50
narrow histone mark
3
control
Date released
188
May, 2021
45
May, 2020
24
May, 2022
23
February, 2023
16
January, 2021
Available data
170
bigWig
135
bam
114
bed narrowPeak
84
tagAlign
51
tsv
2
bed bed3+
Organism
188
Homo sapiens
Biosample type
186
primary cell
in vitro differentiated cells
2
tissue
Organ
1
bone element
1
bone marrow
1
connective tissue
1
pancreas
1
thymus
Project
152
T1D
36
AMP
Genome assembly (visualization)
170
hg19
135
GRCh38
Lab
188
Kyle Gaulton, UCSD
79
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
in vitro differentiated cells
organ_slims!
large intestine
BIOSAMPLE
ASSAY
188 results
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ChIP-seq
total RNA-seq
pCHi-C
primary cell
monocyte
84
51
1
CD8-positive, alpha-beta T cell
33
2
1
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
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tissue
pancreas
1
thymus
1
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