Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
5
total RNA-seq
2
RNA microarray
1
Hi-C
1
single cell RNA-seq
Assay category
154
DNA binding
6
Transcription
1
3D chromatin structure
Target of assay
92
histone
92
histone modification
58
broad histone mark
34
narrow histone mark
33
transcription factor
27
control
7
RNA binding protein
2
chromatin remodeller
Date released
689
February, 2021
406
November, 2017
343
August, 2017
341
May, 2020
306
October, 2019
277
August, 2021
267
May, 2021
218
June, 2019
200
May, 2022
189
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
56
March, 2020
56
November, 2019
51
December, 2017
49
April, 2018
47
September, 2023
40
May, 2024
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
December, 2019
7
August, 2020
5
March, 2019
5
March, 2023
4
January, 2018
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
159
bam
132
bigWig
127
bed narrowPeak
127
bigBed narrowPeak
35
fastq
7
tsv
Organism
163
Homo sapiens
Biosample type
125
tissue
28
cell line
10
primary cell
in vitro differentiated cells
Organ
50
blood vessel
50
vasculature
28
brain
27
blood
27
bodily fluid
21
heart
11
epithelium
8
kidney
7
limb
7
musculature of body
7
spleen
6
liver
5
artery
2
pancreas
Project
163
AMP
Genome assembly (visualization)
132
hg19
131
GRCh38
Lab
163
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
2
audit script error
1
inconsistent control
biosample_type!
in vitro differentiated cells
month_released!
February, 2018
BIOSAMPLE
ASSAY
163 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
RNA microarray
Hi-C
single cell RNA-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 10 more…
cell line
GM12878
27
HepG2
1
primary cell
hepatocyte
5
kidney epithelial cell
5
See all biosamples
Download