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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
406
ChIP-seq
Assay category
406
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
657
February, 2021
406
November, 2017
341
May, 2020
288
October, 2019
273
August, 2021
214
June, 2019
209
May, 2021
155
August, 2017
133
February, 2023
118
May, 2019
102
July, 2019
96
May, 2022
81
November, 2018
80
April, 2019
51
December, 2017
47
September, 2023
42
March, 2020
40
May, 2024
40
September, 2020
35
December, 2018
30
January, 2019
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
8
December, 2019
8
January, 2021
6
November, 2020
5
March, 2023
4
January, 2018
2
June, 2018
1
November, 2019
1
October, 2022
1
September, 2018
0
February, 2018
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
406
Homo sapiens
Biosample type
315
cell line
82
tissue
in vitro differentiated cells
9
primary cell
Organ
315
liver
91
brain
6
epithelium
6
vasculature
3
blood vessel
Project
406
AMP
Genome assembly (visualization)
281
hg19
280
GRCh38
Lab
406
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
biosample_type!
in vitro differentiated cells
month_released!
February, 2020
organ_slims!
pancreas
BIOSAMPLE
ASSAY
406 results
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Clear Filters
ChIP-seq
cell line
HepG2
315
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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