Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 793candidate regulatory elements
  • 760histone modifications
  • 680binding sites
  • 151gene expression
  • 11accessible chromatin
  • 3eQTL
  • 2target gene predictions
  • 1variant allelic effects
Date released
  • 2639February, 2025
  • 2406September, 2022
  • 2401February, 2021
  • 350May, 2021
  • 346February, 2024
  • 333November, 2021
  • 282September, 2023
  • 268June, 2020
  • 148May, 2020
  • 118March, 2020
  • 103January, 2022
  • 101October, 2022
  • 97August, 2021
  • 86January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 40May, 2024
  • 38March, 2025
  • 32February, 2023
  • 31August, 2017
  • 30March, 2024
  • 26November, 2022
  • 19April, 2020
  • 12November, 2019
  • 12October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 2250bed bed3+
  • 151tsv
  • 83txt
  • 14bigWig
  • 3bigBed narrowPeak
Organism
  • 2401Homo sapiens
Collection Tags
  • 1440ChIP-Atlas
  • 793ENCODE
  • 158DGA
  • 21 T2DKP
  • 6T1D
  • 2GTEx
  • 1AMP
  • 1T2DKP
Biosample type
  • 1304cell line
  • 641tissue
  • 456primary cell
  • in vitro differentiated cells
Organ
  • 190epithelium
  • 188kidney
  • 110brain
  • 98connective tissue
  • 91musculature of body
  • 74bodily fluid
  • 71intestine
  • 70blood
  • 70lung
  • 63skin of body
  • 58limb
  • 48heart
  • 48vasculature
  • 46large intestine
  • 44embryo
  • 36blood vessel
  • 36bone element
  • 32extraembryonic component
  • 31pancreas
  • 29prostate gland
  • 29stomach
  • 27lymph node
  • 26mammary gland
  • 25liver
  • 24penis
  • 23adipose tissue
  • 18placenta
  • 18small intestine
  • 18ureter
  • 17eye
  • 15artery
  • 14adrenal gland
  • 12gonad
  • 11thymus
  • 10esophagus
  • 10spleen
  • 10uterus
  • 9skeleton
  • 9spinal cord
  • 8testis
  • 7vein
  • 5bone marrow
  • 5bronchus
  • 5lymphoid tissue
  • 4lymphatic vessel
  • 4mouth
  • 4ovary
  • 4thyroid gland
  • 4trachea
  • 3breast
  • 3nerve
  • 2tongue
  • 2vagina
  • 1pituitary gland
  • 1urinary bladder
Project
  • 2401AMP
Genome assembly (visualization)
  • 2250hg19
  • 11GRCh38
biosample_type!
  • in vitro differentiated cells
BIOSAMPLE
TYPE

2401 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
histone modifications
binding sites
gene expression
accessible chromatin
eQTL
target gene predictions
variant allelic effects
cell line
breast cancer cell119
neuroblastoma cell84
gastric cancer cell92
Rhabdomyosarcoma81
liposarcoma63
tissue
kidney15217
stomach211
heart18111
brain1331
lung17
primary cell
epithelial cell of proximal tubule114
common myeloid progenitor, CD34-positive14
glomerular endothelial cell112
foreskin fibroblast522
mammary epithelial cell333
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego