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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
11
ATAC-seq
6
total RNA-seq
3
single cell RNA-seq
Assay category
25
DNA binding
11
DNA accessibility
9
Transcription
Target of assay
14
transcription factor
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
4
control
3
narrow histone mark
Date released
689
February, 2021
406
November, 2017
343
August, 2017
341
May, 2020
306
October, 2019
277
August, 2021
267
May, 2021
218
June, 2019
200
May, 2022
189
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
88
November, 2018
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
56
March, 2020
56
November, 2019
51
December, 2017
49
April, 2018
47
September, 2023
40
May, 2024
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
December, 2019
7
August, 2020
5
March, 2019
5
March, 2023
4
January, 2018
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
30
bam
30
fastq
26
bigWig
21
bed narrowPeak
21
bigBed narrowPeak
5
tsv
Organism
45
Homo sapiens
Biosample type
23
cell line
22
tissue
Organ
18
blood
18
bodily fluid
14
kidney
7
spleen
5
liver
1
adipose tissue
1
connective tissue
Project
45
AMP
Genome assembly (visualization)
38
GRCh38
27
hg19
Lab
31
AMP-T2D consortium
14
Katalin Susztak, Upenn
biosample_type!
in vitro differentiated cells
month_released!
April, 2019
BIOSAMPLE
ASSAY
45 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
single cell RNA-seq
cell line
GM12878
18
HepG2
5
tissue
kidney
11
3
spleen
7
adipose tissue
1
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