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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 242ChIP-seq
  • 28total RNA-seq
  • 18ATAC-seq
  • 10DNase-seq
  • 4pCHi-C
  • 3Hi-C
  • 1FAIRE-seq
Assay category
  • 242DNA binding
  • 29DNA accessibility
  • 28Transcription
  • 33D chromatin structure
Target of assay
  • 196histone
  • 196histone modification
  • 141narrow histone mark
  • 55broad histone mark
  • 39control
  • 7recombinant protein
  • 7transcription factor
Date released
  • 689February, 2021
  • 406November, 2017
  • 343August, 2017
  • 341May, 2020
  • 306October, 2019
  • 277August, 2021
  • 267May, 2021
  • 218June, 2019
  • 200May, 2022
  • 189February, 2023
  • 168July, 2018
  • 120May, 2019
  • 108July, 2019
  • 88November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 59September, 2020
  • 56March, 2020
  • 56November, 2019
  • 51December, 2017
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 8December, 2019
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4January, 2018
  • 4October, 2022
  • 3August, 2018
  • 3June, 2018
  • 1August, 2022
Available data
  • 246bam
  • 203bigWig
  • 187bed narrowPeak
  • 68bigBed narrowPeak
  • 49tagAlign
  • 14tsv
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 8bed bed3+
  • 2hic
  • 1bedpe bed3+
  • 1hdf5
  • 1tagAlign bed3+
  • 1tar
Organism
  • 306Homo sapiens
Biosample type
  • 242tissue
  • 34primary cell
  • 30cell line
  • in vitro differentiated cells
Organ
  • 86brain
  • 69limb
  • 47blood vessel
  • 47vasculature
  • 42nerve
  • 35epithelium
  • 30kidney
  • 26artery
  • 21eye
  • 21vein
  • 18pancreas
  • 8heart
  • 7liver
  • 4gonad
  • 4ovary
  • 2connective tissue
  • 2pituitary gland
  • 1adipose tissue
  • 1lymph node
  • 1skin of body
Project
  • 306AMP
Genome assembly (visualization)
  • 209hg19
  • 203GRCh38
Lab
  • 306AMP-T2D consortium
Audit category:
  • 17inconsistent ontology term
  • 1audit script error
Audit category:
  • 1inconsistent assembly
biosample_type!
  • in vitro differentiated cells
BIOSAMPLE
ASSAY

306 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
Hi-C
FAIRE-seq
tissue
islet of Langerhans2114134
tibial nerve35412
tibial artery2312
heart521
brain51
primary cell
endothelial cell of umbilical vein17211
epithelial cell of proximal tubule7
kidney glomerular epithelial cell11
kidney tubule cell11
Heart fetal (cardiac muscle cell)1
cell line
Panc11311
RCC 7860 HIF1a re-expression41
RCC 7860 HIF2a over-expression31
RCC 7860 vector31
glomerular visceral epithelial cell11
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