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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
76
accessible chromatin
73
candidate regulatory elements
66
target gene predictions
47
gene expression
40
chromatin state
28
binding sites
21
eQTL
21
histone modifications
14
differential activity
14
variant allelic effects
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
108
September, 2022
98
February, 2021
50
November, 2021
17
February, 2024
17
June, 2020
15
September, 2023
12
October, 2022
11
August, 2021
10
May, 2021
9
February, 2020
9
January, 2020
8
March, 2020
8
May, 2020
7
March, 2023
6
January, 2022
3
April, 2020
3
August, 2017
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
November, 2022
1
October, 2019
Available data
286
bed bed3+
63
tsv
53
bigWig
37
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
410
Homo sapiens
Biosample type
283
primary cell
95
tissue
in vitro differentiated cells
31
cell line
1
stem cell
Organ
923
epithelium
651
kidney
462
brain
410
connective tissue
373
musculature of body
311
lung
289
intestine
274
pancreas
264
vasculature
254
heart
244
limb
218
bodily fluid
207
blood
204
blood vessel
195
skin of body
185
embryo
174
large intestine
149
liver
141
extraembryonic component
119
stomach
103
eye
89
bone element
88
adipose tissue
84
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
ureter
62
lymph node
58
penis
50
gonad
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
vein
19
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
334
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
339
hg19
118
GRCh38
2
hg18
biosample_type!
in vitro differentiated cells
organ_slims!
thymus
vein
BIOSAMPLE
TYPE
410 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
binding sites
eQTL
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
osteoblast
5
2
2
2
1
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
+ See 44 more…
tissue
adipose tissue
2
7
8
3
6
1
4
1
subcutaneous adipose tissue
2
2
5
1
6
1
1
3
omental fat pad
2
5
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
2
1
2
+ See 6 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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