Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 77target gene predictions
  • 44candidate regulatory elements
  • 22chromatin state
  • 13binding sites
  • 12accessible chromatin
  • 9histone modifications
  • 8gene expression
Date released
  • 63September, 2022
  • 51February, 2024
  • 44February, 2021
  • 10June, 2020
  • 8August, 2021
  • 4May, 2021
  • 2November, 2021
  • 1August, 2017
  • 1March, 2020
  • 1October, 2022
Available data
  • 156bed bed3+
  • 21bed bed9
  • 8tsv
  • 2bigWig
Organism
  • 185Homo sapiens
Collection Tags
  • 63EpiMap
  • 514DN
  • 31ChIP-Atlas
  • 24ENCODE
  • 10AMP
  • 5DGA
  • 2T2DKP
Biosample type
  • 127cell line
  • 35tissue
  • in vitro differentiated cells
  • 22primary cell
  • 1stem cell
Organ
  • 3351blood
  • 2900vasculature
  • 2860blood vessel
  • 2853bodily fluid
  • 2659vein
  • 926epithelium
  • 891brain
  • 754kidney
  • 482heart
  • 466connective tissue
  • 440lung
  • 384musculature of body
  • 358intestine
  • 313pancreas
  • 287skin of body
  • 244limb
  • 232liver
  • 226large intestine
  • 185embryo
  • 169extraembryonic component
  • 155eye
  • 140adipose tissue
  • 140stomach
  • 109muscle organ
  • 104bone element
  • 102adrenal gland
  • 101mammary gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 93uterus
  • 88artery
  • 87prostate gland
  • 73ureter
  • 64gonad
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 58penis
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21mouth
  • 19lymphatic vessel
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 183AMP
  • 2ENCODE
Genome assembly (visualization)
  • 177hg19
  • 74GRCh38
biosample_type!
  • in vitro differentiated cells
BIOSAMPLE
TYPE

185 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
gene expression
cell line
H1-hESC39112118
H9871
H7-hESC21111
HUES612111
HUES8411
tissue
chorionic villus484
trophoblast34211
embryonic facial prominence1111
first pancreatic bud11
cardiogenic mesoderm1
primary cell
trophoblast cell57411
primordial germ cell11
placental hematopoietic stem cell1
trophoblast giant cell1
stem cell
H1-hESC1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego