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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
127
ChIP-seq
Assay category
127
DNA binding
Target of assay
127
histone
127
histone modification
71
broad histone mark
56
narrow histone mark
43
control
6
RNA binding protein
6
transcription factor
3
nucleotide modification
Date released
64
October, 2019
21
September, 2018
14
August, 2017
10
November, 2019
9
May, 2019
3
August, 2021
2
June, 2019
2
November, 2017
1
March, 2020
1
May, 2021
Available data
126
bam
123
bigWig
121
bed narrowPeak
65
bigBed narrowPeak
37
fastq
4
bed broadPeak
4
bigBed broadPeak
3
bed bed3+
3
tagAlign
Organism
127
Homo sapiens
Biosample type
66
primary cell
49
tissue
in vitro differentiated cells
12
cell line
Organ
187
brain
150
pancreas
97
heart
91
liver
78
epithelium
71
vasculature
70
blood vessel
49
limb
41
connective tissue
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
125
AMP
2
T1D
Genome assembly (visualization)
123
hg19
120
GRCh38
Lab
127
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
4
inconsistent control read length
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
127 results
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Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
15
pancreatic ductal cell
13
pancreatic acinar cell
8
epithelial cell of proximal tubule
7
pancreatic alpha cell
7
+ See 6 more…
tissue
tibial nerve
24
tibial artery
18
muscle of leg
6
islet of Langerhans
1
cell line
EndoC_BH1
12
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