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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
21
accessible chromatin
21
candidate regulatory elements
20
gene expression
19
target gene predictions
15
chromatin state
12
binding sites
12
histone modifications
8
eQTL
4
differential activity
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Date released
40
September, 2022
26
February, 2024
21
February, 2021
10
August, 2021
10
March, 2020
4
June, 2020
4
March, 2023
4
November, 2021
3
August, 2017
3
May, 2021
2
February, 2020
2
January, 2020
2
May, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
May, 2024
1
November, 2019
1
October, 2022
1
September, 2018
Available data
91
bed bed3+
24
tsv
21
bigWig
12
bed bed9
1
bam
1
bigBed bed9
Organism
139
Homo sapiens
Biosample type
58
tissue
55
primary cell
26
cell line
in vitro differentiated cells
Organ
933
epithelium
651
kidney
462
brain
connective tissue
373
musculature of body
311
lung
289
intestine
274
pancreas
267
vasculature
256
heart
244
limb
218
bodily fluid
207
blood
204
blood vessel
195
skin of body
185
embryo
174
large intestine
151
liver
141
extraembryonic component
119
stomach
103
eye
89
bone element
88
adipose tissue
84
mammary gland
84
small intestine
83
uterus
prostate gland
75
artery
73
adrenal gland
73
placenta
64
ureter
62
lymph node
58
penis
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
1
pericardium
Project
135
AMP
4
ENCODE
Genome assembly (visualization)
112
hg19
57
GRCh38
2
hg18
biosample_type!
in vitro differentiated cells
organ_slims!
connective tissue
prostate gland
BIOSAMPLE
TYPE
139 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
tissue
liver
4
13
1
10
9
1
2
7
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
8
2
13
3
1
1
4
2
endothelial cell of hepatic sinusoid
6
4
6
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
cell line
HepG2
2
2
3
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
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