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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
3
MeRIP-seq
Assay category
7
DNA binding
Target of assay
33
histone
33
histone modification
19
broad histone mark
14
narrow histone mark
13
transcription factor
10
control
5
RNA binding protein
3
nucleotide modification
Date released
5
May, 2021
3
November, 2020
2
August, 2017
Available data
bam
85
fastq
14
tagAlign
13
bigWig
6
bed bed3+
Organism
10
Homo sapiens
Biosample type
tissue
7
in vitro differentiated cells
3
cell line
primary cell
Organ
3
epithelium
3
pancreas
2
connective tissue
Project
10
AMP
Lab
5
Kyle Gaulton, UCSD
Bing Ren, UCSD
3
Rohit N. Kulkarni, M.D., Ph.D.
2
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
biosample_type!
primary cell
tissue
files.file_type!
bam
lab.title!
Bing Ren, UCSD
BIOSAMPLE
ASSAY
10 results
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Clear Filters
ChIP-seq
MeRIP-seq
in vitro differentiated cells
embryonic stem cell
5
adipocyte
2
cell line
EndoC_BH1
3
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