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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
163
DNase-seq
94
ChIP-seq
Assay category
163
DNA accessibility
94
DNA binding
Target of assay
42
transcription factor
31
histone
31
histone modification
21
control
16
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
667
February, 2021
397
November, 2017
347
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
80
April, 2019
80
November, 2018
74
October, 2018
66
May, 2022
63
July, 2019
63
March, 2020
61
November, 2019
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
257
bam
235
bed narrowPeak
235
bigWig
213
bigBed narrowPeak
178
bed bed3+
163
bed broadPeak
163
bigBed broadPeak
94
fastq
Organism
257
Homo sapiens
Biosample type
211
tissue
primary cell
43
in vitro differentiated cells
3
stem cell
Organ
68
kidney
63
liver
32
limb
32
musculature of body
27
heart
25
brain
19
epithelium
18
ureter
13
embryo
4
pancreas
3
blood vessel
3
eye
3
vasculature
2
artery
1
adipose tissue
1
connective tissue
Project
257
AMP
Genome assembly (visualization)
240
GRCh38
224
hg19
Lab
257
AMP-T2D consortium
Audit category:
27
inconsistent control
5
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
biosample_type!
primary cell
files.file_type!
bed bedMethyl
BIOSAMPLE
ASSAY
257 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
liver
38
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
+ See 36 more…
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
stem cell
hESC
3
See all biosamples
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