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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
332
ChIP-seq
6
single cell RNA-seq
Assay category
332
DNA binding
6
Transcription
Target of assay
197
transcription factor
68
control
66
recombinant protein
65
histone
65
histone modification
40
broad histone mark
30
RNA binding protein
25
narrow histone mark
11
chromatin remodeller
1
other context
other post-translational modification
Date released
667
February, 2021
332
November, 2017
325
August, 2017
315
August, 2021
275
October, 2019
194
May, 2020
193
May, 2021
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
80
April, 2019
77
July, 2019
75
November, 2018
74
October, 2018
66
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
19
April, 2020
19
October, 2017
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
4
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
387
bam
329
bigWig
319
fastq
305
bed narrowPeak
304
bigBed narrowPeak
78
tagAlign
bed broadPeak
57
bigBed broadPeak
6
tsv
3
tar
Organism
338
Homo sapiens
Biosample type
256
cell line
82
tissue
primary cell
Organ
256
liver
76
brain
6
pancreas
Project
338
AMP
Genome assembly (visualization)
230
GRCh38
213
hg19
Lab
338
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
biosample_type!
primary cell
files.file_type!
bed broadPeak
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
338 results
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Clear Filters
ChIP-seq
single cell RNA-seq
cell line
HepG2
256
tissue
layer of hippocampus
22
caudate nucleus
14
substantia nigra
14
cingulate gyrus
12
middle frontal area 46
12
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