Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
Assay category
29
DNA binding
Target of assay
662
histone modification
661
histone
421
transcription factor
350
narrow histone mark
311
broad histone mark
276
control
91
RNA binding protein
89
recombinant protein
29
chromatin remodeller
5
nucleotide modification
4
other context
4
other post-translational modification
Date released
11
November, 2017
7
November, 2018
6
January, 2019
3
December, 2017
2
December, 2018
Available data
33
bam
33
bed narrowPeak
33
bigBed narrowPeak
33
bigWig
33
fastq
bed broadPeak
4
bigBed broadPeak
Organism
29
Homo sapiens
Biosample type
26
cell line
2
tissue
1
in vitro differentiated cells
Organ
19
liver
10
blood
10
bodily fluid
connective tissue
1
epithelium
Project
29
AMP
Genome assembly (visualization)
29
hg19
27
GRCh38
Lab
29
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
10
inconsistent control read length
8
inconsistent control run_type
biosample_type!
primary cell
files.file_type!
bed broadPeak
organ_slims!
bone element
connective tissue
BIOSAMPLE
ASSAY
29 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
16
GM12878
10
tissue
liver
2
in vitro differentiated cells
hepatocyte
1
Download